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Transatlantic shout-out to @pinkpetri.bsky.social for these excellent stickers that I gave to @jananiravi.bsky.social, who then immediately stuck them on her office doorway. Since folks keep asking where she got them, go check out the shop! www.etsy.com/shop/pinkpetri
Mar 18, 2025
Enjoyed working w/ Stephen & Agnes on this! Gave me a chance to think systematically about where AI 🤖 can backstop human 🧑🏼‍🔬 fallibilities in peer review (fatigue, ordering effects, bias) vs. where human judgment remains essential (novelty, feasibility, creative leaps) while grappling w/ the risks.
So... A friend was supposed to give a PURELY SCIENTIFIC talk at NIH within the next couple of weeks and it was cancelled because of a "new process" where all speakers/talks have to be CLEARED BY A POLITICAL APPOINTEE.
How to network: ❌Go to a conference ✅Make microbiology-related parody stickers
3mo
Evan Brenner
3mo
Mar 19, 2025
ALT: a large screen shows a man 's face and says ingsoc
media.tenor.com
a large screen shows a man 's face and says ingsoc
Explore how DBMI is revolutionizing care where it matters most: at the bedside ▶️ bit.ly/4hZwkzm
Known for decades: DNA sequence drives nucleosome "rotational positioning" (which face of DNA contacts histones) But: How does this persist when remodelers & transcription constantly mobilize nucleosomes? Our new preprint 1/ : www.biorxiv.org/content/10.6...
This preprint is now out after peer review! Check it out: www.cell.com/cell-genomic.... Huge congrats (and thanks!) to the whole team that contributed!
Arjun Krishnan
Nov 20, 2024
Jeremy Berg
6mo
May 21, 2025
The postdocs (me and @evanbrenner.bsky.social ) enjoying the Holiday Selfie Station on day 1 of Byte Into Sweets, Holiday Edition at @cubiomedinfo.bsky.social | @cuanschutz.bsky.social
Thrilled to share our new Forum article in @cp-trendsmicrobiol.bsky.social We (@charmievang.bsky.social @evanbrenner.bsky.social @jananiravi.bsky.social) explore how #MultiOmics + #MachineLearning/#DeepLearning can transform AMR prediction—spotlighting emerging opportunities and challenges!
Keira Cozens
www.biorxiv.org
Dec 3, 2024
Transatlantic shout-out to @pinkpetri.bsky.social for these excellent stickers that I gave to @jananiravi.bsky.social, who then immediately stuck them on her office doorway. Since folks keep asking where she got them, go check out the shop! www.etsy.com/shop/pinkpetri
Jun 2, 2025
CU Department of Biomedical Informatics
Systematic analysis of nonsense variants uncovers peptide release rate as a novel modifier of nonsense-mediated mRNA decay
Kolakada et al. discover that the amino acid preceding a premature termination codon influences nonsense-mediated mRNA decay efficiency. They identify peptide release rate during translation terminati...
www.cell.com
Mar 18, 2025
Peer review reliability is shockingly low. Meta-analyses show reviewer agreement barely above chance, and grant outcomes often depend more on who reviews than what's proposed. Our new preprint with Agnes Urban and Arjun Krishnan @compbiologist.bsky.social : papers.ssrn.com/sol3/papers.... 🧵 1/
Srinivas Ramachandran