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Could the #ribosome be a selfish element? @mkrupovic.bsky.social & Eugene Koonin propose that the #evolution of life can viewed as a ribosomal takeover, where the ribosome evolved to consume most of the cell’s resources. 🧪 #OriginsOfLife
1mo
In this Essay, the evolution of life is construed as a ribosomal takeover, whereby the ribosome evolved to consume most of the cell’s resources, while other cellular componentry ensured the…
plos.io
The selfish ribosome
PLOS Biology
Excited to finally share our preprint on mapping the genetic interaction network of the DNA damage response with combinatorial knockout screens led by Sam Hayward, Alina Vaitsiankova, and Tomas Lama-Diaz! www.biorxiv.org/cgi/content/...
10d
The DNA damage response (DDR) is a complex network of cellular pathways that ensures the faithful maintenance of our genomes upon a wide array of genomic insults. To elucidate the functional architect...
Marked for destruction The significance of the first FDA-approved PROTAC lies not in proving that targeted protein degradation is superior to conventional therapies, but in proving that degrading proteins is possible as a therapeutic go.nature.com/4x3NYt7
Mapping the genetic landscape of the DNA damage response with Cas12a-based combinatorial knockout screens
www.biorxiv.org
Alberto Ciccia
2d
We identify novel catalytically impaired PARP1 mutants and show that the toxicity of some variants in cells can be rescued by the PARP inhibitor saruparib. Thus, in specific contexts, saruparib plays a pro-survival role rather than a cytotoxic one. www.cell.com/cell-reports...
"I would like to emphasize the importance of question-driven science...young scientists might enjoy science more if they are thinking about questions rather than just collecting data" journals.biologists.com/jcs/article/...
25d
1mo
Everything you wanted to know about the protein chemistry behind how amino-acid changes affect the cellular abundance of proteins from @tkschulze.bsky.social Effects of residue substitutions on the cellular abundance of proteins doi.org/10.7554/eLif...
Very interesting articles about cancer metabolism this month, and insightful reviews. Highlighting fresh articles and comments about cysteine and glutathione from @lucasbsullivan.bsky.social @ginadenicola.bsky.social @harrislab.bsky.social and others metabolist.wordpress.com/2026/05/04/m...
19d
1mo
Our paper is now out in @natcellbio.nature.com! @craigmcrews.bsky.social www.nature.com/articles/s41... We identify a new regulator of the quality control system that protects one of nature's most important molecular machines: the ribosome. QC failure → unmitigated metabolic stress & cell death.
Noboru Mizushima is Professor of Biochemistry and Molecular Biology at the University of Tokyo, Japan, where he runs a laboratory studying the mechanisms and physiological functions of autophagy and o...
journals.biologists.com
Schützenhofer et al. show that expression of catalytically impaired PARP1 mutants is toxic to cells, which can be overcome by treatment with saruparib, a PARP1-specific inhibitor that displays a pro-r...
www.cell.com
Interview with Noboru Mizushima – President of the Japan Society for Cell Biology
PARP1-specific inhibitor displays PARP1-detrapping activity
Cystine / Glutathione / NADPH SLC33A1 exports oxidized glutathione to maintain endoplasmic reticulum redox homeostasis Shanshan Liu  (刘珊珊), Mark Gad, Caifan Li  (李采蘩), Kevin Cho, Yuyang Liu  (刘雨洋),…metabolist.wordpress.com
1mo
Nature Biotechnology
MetaboList – April 2026
www.nature.com
Douglas et al. study the E3 ligase HOIL-1, mutated in patients with a type of myopathy. Mutant HOIL-1 influences the sensitivity to disulfidptosis initiated by ZAKα–ATF4 in glucose starvation and inte...
The atypical E3 ligase HOIL-1 safeguards the ribosome during cellular stress - Nature Cell Biology
“In other words, unwritten science is not just incomplete; it simply does not exist for the purposes of the field. When you look at it this way, the job of a scientist - having ideas, testing them, and persuading others they are right - turns out to be, fundamentally, an act of writing.”
1mo
4d
Doing the periodic cleaning of used plasmid miniprep columns and realized in honor of Earth Day it may be worth reminding you molecular biologists: Plasmid miniprep columns can be cleaned and reused essentially indefinitely! Just add 1 M HCl, soak overnight and wash 3x w/ water. Save $ and plastic
Todd Douglas
Richard Sever
Kresten Lindorff-Larsen
Cristina Muñoz Pinedo
MichaelMcMurray lab
Isabel
Just start writing. My new post: substack.com/home/post/p-...
4d
Ran Blekhman