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Scaling covalent ligand discovery through dynamic combinatorial library-versus-proteome screening #nature #MassSpecRSS
(BioRxiv All) The dynamic inositol phosphate network during development in Drosophila melanogaster: Inositol phosphates (InsPs) and inositol pyrophosphates (PP-InsPs) are key regulators of cellular signaling and metabolism, yet developmental changes in the InsP/PP-InsP network… #BioRxiv #MassSpecRSS
(RCM) Bioanalysis of Ametryn by UHPLC‐MS3 Coupled With Multiple Fragmentation to Decrease Interference and Enhance Sensitivity: ABSTRACT Rationale Ametryn poses significant risks to aquatic ecosystems, but conventional MRM methods suffer from matrix… #RapidCommunMassSpectrom #MassSpecRSS
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(CEJ) Probing the Influence of Sulfur–Aromatic Interactions on the Electronic Structure of Gas‐Phase Peptides: Chemistry – A European Journal, Volume 32, Issue 23, 16 June 2026. (/CEJ)
(CEJ) Synthesis of Oligonucleotide Conjugates Employing a Diselenide Linker: Chemistry – A European Journal, EarlyView. (/CEJ)
(J Mass Spectrom) In Memory of Prof. Günter Allmaier (1956–2022): Journal of Mass Spectrometry, Volume 61, Issue 7, July 2026. #JMassSpectrom #MassSpecRSS
(BioRxiv All) Regional connectivity and partial residency of capelin (Mallotus villosus) in the Gulf of St. Lawrence inferred from otolith chemistry: Capelin (Mallotus villosus), a key forage fish in the Northwest Atlantic, links zooplankton to predators including commercial… #BioRxiv #MassSpecRSS
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(Angew Chem) Strain Engineering via W–O–Ru Interfacial Coupling to Suppress Lattice Oxygen Activation for Stable Acidic Water Electrolysis: Constructing atomically coupled W–O–Ru interfacial units on RuO2 triggers a dynamic strain evolution during the oxygen evolution… (RSS) #AngewChem #MassSpecRSS
(RCM) Determination of Residual Nitrilase in Brivaracetam Using Characteristic Peptides by Liquid Chromatography–Mass Spectrometry: ABSTRACT Rationale Nitrilases are widely used as biocatalysts in pharmaceutical manufacturing because of their high… #RapidCommunMassSpectrom #MassSpecRSS
(Talanta) Online solid-phase extraction coupled to liquid chromatography-tandem mass spectrometry for fungicide translocation studies in soybean plants: Publication date: 1 December 2026 Source: Talanta, Volume 310 Author(s): Eliézer de Oliveira, Carla Beatriz Grespan Bottoli #Talanta #MassSpecRSS
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Kermit Murray
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Kermit Murray
Chemical proteomics can reveal how small molecules act across the proteome, but current single-compound screens are slow and require premade libraries. Here, the authors develop a library-versus-proteome platform that rapidly discovers covalent ligands and potent inhibitors of cancer-relevant targets.
dlvr.it
dlvr.it
Inositol phosphates (InsPs) and inositol pyrophosphates (PP-InsPs) are key regulators of cellular signaling and metabolism, yet developmental changes in the InsP/PP-InsP network in eukaryotic systems remain poorly understood. Here, we combine isomer-resolved capillary electrophoresis-mass spectrometry (CE-MS) with genetic perturbations to characterize InsP metabolism during the Drosophila melanogaster development. Our analyses reveal extensive developmental reprogramming of the InsP pathway, with early developmental stages exhibiting broad lower-order isomer diversity that progressively narrows into a more restricted metabolic state enriched in Ins(1,3,4,5,6)P5, InsP6, and PP-InsPs at later stages. Metamorphosis is characterized by a marked increase in 5-PP-InsP5, which emerges as the predominant pyrophosphate species in adults. Perturbation of dedicated kinases suggests that this metabolic remodeling is essential for developmental progression. RNAi-mediated IPK2 depletion disrupts higher-order InsP synthesis by reducing InsP5 levels, and results in failed metamorphosis. IPK1 depletion delays development and induces pronounced isomer-selective redistribution within the InsP5 pool, indicating network-level changes beyond simple precursor accumulation. IP6K depletion specifically abolishes 5-PP-InsP5 production, impairs tissue morphogenesis during pupal stages, and causes rapid post-eclosion lethality. Unexpectedly, depletion of either IPK2 or IP6K leads to the presence of 2-PP-InsP5. Collectively, these findings establish the Drosophila melanogaster InsP pathway as a dynamically regulated developmental network, particularly rich in previously undescribed InsP isomers, in which stage-specific metabolic remodeling parallels metamorphosis, tissue maturation, and adult viability.
Scaling covalent ligand discovery through dynamic combinatorial library-versus-proteome screening - Nature Communications
The dynamic inositol phosphate network during development in Drosophila melanogaster
dlvr.it
Chemistry – A European Journal, Volume 32, Issue 23, 16 June 2026.
Capelin (Mallotus villosus), a key forage fish in the Northwest Atlantic, links zooplankton to predators including commercial fishes, seabirds, and marine mammals, yet its life-cycle movements in the Gulf of St. Lawrence (GSL) remain poorly understood. Between 2022 and 2024, otoliths from 927 individuals collected during and after spawning were analysed by Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS). Building on previous work on regional structuring, seven trace elements (Li, B, Mg, K, Zn, Sr, Ba) were used to discriminate three regions. Early-life regional signatures were inferred through an edge-to-core approach, assigning otolith core chemistry to one of these regions using quadratic discriminant analysis. The core was treated as an integrated early-life signal (late-larval to early juvenile period) rather than a strictly natal signature. Spatial variation in core chemistry was consistent across cohorts, mirroring the stability documented on the otolith edge. Results revealed widespread dispersal alongside partial regional residency: individuals with northeastern early-life signatures showed the strongest correspondence between early-life and capture regions, whereas other regions were more connected. Fish sampled during spawning were more often reassigned to their inferred early-life region than post-spawning fish, a regional-scale homing-like pattern consistent with regional spawning fidelity. This coexistence of dispersive and resident strategies likely generates a portfolio effect buffering the population against environmental variability and localised reproductive failures.
dlvr.it
Probing the Influence of Sulfur–Aromatic Interactions on the Electronic Structure of Gas‐Phase Peptides
Regional connectivity and partial residency of capelin (Mallotus villosus) in the Gulf of St. Lawrence inferred from otolith chemistry
dlvr.it
Publication date: 1 December 2026 Source: Talanta, Volume 310 Author(s): Eliézer de Oliveira, Carla Beatriz Grespan Bottoli
Online solid-phase extraction coupled to liquid chromatography-tandem mass spectrometry for fungicide translocation studies in soybean plants
Chemistry – A European Journal, EarlyView.
dlvr.it
Synthesis of Oligonucleotide Conjugates Employing a Diselenide Linker
ABSTRACT Rationale Ametryn poses significant risks to aquatic ecosystems, but conventional MRM methods suffer from matrix interference and limited sensitivity. To overcome these limitations, we established a more selective and sensitive UHPLC-MS3 approach that effectively suppresses background noise and enhances signal-to-noise ratio, enabling reliable quantification of ametryn in zebrafish tissues. Methods A novel UHPLC-MS3 method with electrospray ionization was developed. Quantification employed the MS3 transition m/z 228.0 → 186.1 → 158.0. Five zebrafish tissues (liver, muscle, brain, intestine, gill) were analyzed following sample preparation. Fast chromatographic separation was achieved in 2.8 min. Results Compared with MRM, the MS3 method substantially reduced matrix interference, enhanced signal intensity from 6.4 × 104 to 1.6 × 107 cps, and increased the signal-to-noise ratio from 6.3 to 45. The assay exhibited excellent linearity (10–1000 pg/mL), and validation results for accuracy, precision, recovery, matrix effects, and stability all met FDA bioanalytical requirements. Conclusions This study presents the first application of UHPLC-MS3 for quantitative analysis of ametryn in multiple zebrafish tissues, providing a reliable high-throughput platform for residue monitoring and mechanistic toxicology research.
dlvr.it
Bioanalysis of Ametryn by UHPLC‐MS3 Coupled With Multiple Fragmentation to Decrease Interference and Enhance Sensitivity
ABSTRACT Rationale Nitrilases are widely used as biocatalysts in pharmaceutical manufacturing because of their high stereoselectivity and mild reaction conditions. However, residual nitrilase in final drug products may compromise product quality and safety, highlighting the need for sensitive and reliable analytical methods for its monitoring and control. Methods In this study, a liquid chromatography–tandem mass spectrometry (LC–MS/MS) method was developed for the determination of residual nitrilase in pharmaceutical formulations. Results Recombinant nitrilase expressed in Escherichia coli was purified by Ni2+ affinity chromatography and lyophilized prior to analysis. Following systematic optimization of digestion and chromatographic conditions, the method achieved a detection limit of 0.17 μg/g. The LC–MS/MS method was successfully applied to the analysis of brivaracetam samples at a concentration of 2000 μg/g, with residual nitrilase levels consistently below 85 μg/g, meeting relevant quality control requirements. Conclusions In this study, a sensitive and reliable LC–MS/MS method was developed for the determination of residual nitrilase in brivaracetam. The proposed method may serve as a general analytical strategy for quality control of nitrilase-related pharmaceutical products.
dlvr.it
Determination of Residual Nitrilase in Brivaracetam Using Characteristic Peptides by Liquid Chromatography–Mass Spectrometry
Journal of Mass Spectrometry, Volume 61, Issue 7, July 2026.
dlvr.it
In Memory of Prof. Günter Allmaier (1956–2022)
Constructing atomically coupled W–O–Ru interfacial units on RuO2 triggers a dynamic strain evolution during the oxygen evolution reaction. An initial tensile strain secures structural stability, while a self-adjusting transition to interfacial compression optimizes catalytic activity. This dynamic strain engineering effectively decouples the long-standing activity-stability trade-off, enabling highly efficient and durable acidic water oxidation. ABSTRACT Developing highly active and durable acidic oxygen evolution reaction (OER) electrocatalysts remains a central challenge for proton-exchange membrane water electrolysis (PEMWE). Here, we combine theory-guided design, atomic-layer engineering, and operando spectroscopy to create a structurally robust, mechanistically tuned Ru-based catalyst. Density functional theory reveals that depositing W1O3 onto RuO2 maximizes Ru and O vacancy formation energies, outperforming other tested transition metals. Guided by this, we employ atomic layer deposition to construct atomically coupled W–O–Ru interfacial units on RuO2 (W–O–RuO2), generating a tensile-stressed surface while preserving the rutile core. Comprehensive in situ spectroscopy and mass spectrometry demonstrate that this architecture effectively suppresses lattice–oxygen activation, shifting the reaction from a lattice–oxygen mechanism to a more reversible adsorbate evolution mechanism. Operando x-ray absorption spectroscopy confirms the dynamic stability of the W–O–Ru interface during OER, which evolves into a resilient, mildly compressive (1%) state without degrading. Consequently, W–O–RuO2 demands a mere 168 mV overpotential at 10 mA cm− 2 and sustains 1 A cm− 2 in a PEMWE device for 1000 h with an ultra-low degradation rate of 63.3 µV/h. This work establishes interfacial unit engineering as a generalizable blueprint for designing exceptionally stable acidic OER catalysts.
dlvr.it
Strain Engineering via W–O–Ru Interfacial Coupling to Suppress Lattice Oxygen Activation for Stable Acidic Water Electrolysis