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Stanford Biophysics PhD Student with Dmitri Petrov and Ben Good. evolution, ecology, genomics, microbiomes, biophysics :) she/her https://sophiejwalton.github.io
Sophie Jean Walton









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Dr. Indra Gonzalez Ojeda gave a great thesis defense this morning, including some wisdom for starting PhD students, or frankly, anyone.
1mo
Tami Lieberman
Excited to be at #PEQG26! I have a poster tonight on measuring selection on intraspecies variation in large microbial communities (415W), would love to hear what folks think!
Awesome paper from the Moeller lab on diesentangling the influence of geography and host ancestry to gut bacterial strain divergence www.nature.com/articles/s41...
Preprint of some of my postdoctoral research with @mfrederickson.bsky.social examining the evolution of beneficial microbial symbionts in duckweed www.biorxiv.org/content/10.6...
1d
Excited to share new work on two sex-linked pigment traits in Xiphophorus! This project was led by undergrad @lagiven.bsky.social, who’s worked with me for the last 3(!) years. www.biorxiv.org/content/10.6...
Thrilled to present my dissertation research at the Hamilton Symposium! We used approaches including GWAS, long-read sequencing, phylogenetic methods, and behavior experiments to uncover the genetic basis and evolutionary history of a shared polymorphism. Can’t wait to share what we’ve learned!
Please share widely! We will imminently be posting a technician position in our lab group since @rheasood.bsky.social is off to grad school 🙌! If you know of anyone excited about molecular biology, evolution, and functional genomics please have them reach out (schumer at stanford). Start date ~June
16d
8d
Our paper on recurrent independent duplications in the primate amylase locus is now out in Cell Reports! Huge thanks to @petarpajic, @spit-lab.bsky.social and @gokcumenlab.bsky.social for their support. More about the work in the thread below from when we first shared the preprint last August.
New paper out now in Theoretical Ecology, led by @theogibbs.bsky.social in collaboration with me, @kjmd.bsky.social, @cynthiasilveira.bsky.social, and Lisa McManus 🥳🕺