This is now published in Genome Research (doi.org/10.1101/gr.2...). Thank you everyone for your feedback and also the anonymous reviewers who helped to greatly improve the paper. I hope this becomes a useful resource for the community.
Wow! What a tool: half million downloads from Bioconda - Congrats @robp.bsky.social and Combine-Lab! 👏 Happy to see SSHash plugged here.
Well... we read&debug the code, for example?
I made this sculpture (clay and acrylic paints) for my mother’s birthday present 🎂 Artistic expression has always been part of my life, besides science.
Accepted to ISMB'26. Revised paper is here: jermp.github.io/assets/pdf/p.... I'd like to thank @robp.bsky.social once again and all the received feedback from the reviewers. To me, ISMB has had the highest quality review process over the past few years!
Rob and his work are unique gifts for our field. I'm glad our paths crossed!
Really proud of @ale-campa.bsky.social for his amazing contributions to the Fulgor ⚡ index! I'm very excited for what's next 🙂 CC @robp.bsky.social @zaminiqbal.bsky.social
C++ code is here github.com/jermp/sshash and also available via Bioconda bioconda.github.io/recipes/ssha.... Rust code is here instead github.com/COMBINE-lab/... (thank you again @robp.bsky.social!)