The KULeuven Department of Physics and Astronomy is recruiting a new faculty member as Research Professor in Experimental Biophysics. The candidate is expected to develop and apply innovative experimental techniques to study the structure and behavior of living systems from a physics perspective.
Applications are open for graduate students and postdocs. Housing, some meals, and course materials are included.
Kinetic models can now capture the full cell cycle with division, cool to see the progress in whole-cell modeling. Worth a read!
The Quantitative Cell Biology institute (QCB) at UIUC is hosting a summer school on studying living cells, both computationally and experimentally. Participants choose a theme: whole-cell computational modeling (Martini + Lattice Microbes), MINFLUX, or AFM-IR. Registration is free!
How do we build realistic cellular environments for simulations?
@cg-martini.bsky.social, @ma3ke.bsky.social, @janstevens.bsky.social answer this with Bentopy, an integration tool for proteomics, metabolomics, and structural data that rapidly assembles simulation-ready molecular models.
After nearly 6 years of work, I’m excited (and honestly relieved) to share our paper in PNAS:
www.pnas.org/doi/10.1073/...
D614G reshapes allosteric networks and opening mechanisms of SARS-CoV-2 spikes
Very happy to finally see it out in the world!!
Happy to share the review that @apoorvam.bsky.social, Vanessa and I wrote about recent trends in modeling and simulation of biological phenomena in crowded and cell-like environments! I really like this topic, for me this is the future of #compchem.
arxiv.org/abs/2603.26974
How does biomolecular condensation and #LLPS look for membrane proteins in bacteria?🔬
See our📜: doi.org/10.1038/s414...
@linnikdmitrii.bsky.social et al. "Structural and functional implications of phase separation of membrane protein LacY in E. coli🦠" #NatComm
Here's our latest model development effort, with a set of Martini 3 steroid hormones parameterized straight from structures in the PDB.
A big shout out to Tâmela and the team for the impressive work!
Preprint: chemrxiv.org/doi/full/10....
Repo: github.com/Martini-Forc...
#compchem #compbiol
Enrico Carlon
Jan Stevens
Jan Stevens
Jan Stevens
Matthias Heinemann
Protein Society
Ivan Maslov
Dr. Fiona
Ariane Nunes Alves
Manuel N. Melo at ITQB NOVA
While experiments and computer simulations to study biological phenomena are usually performed in diluted in vitro conditions, such phenomena happen inside the cellular cytoplasm, an environment dense...
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...