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Tired of fragmented bacterial GWAS workflows? Try BaGPipe (Bacterial GWAS Pipeline)—a fully automated, flexible Nextflow pipeline integrating Pyseer for streamlined association studies. Reproducible. Scalable. Efficient. doi.org/10.1101/2025... #Nextflow #BacterialGWAS #AMR #Bioinformatics
Mar 2, 2025
Microbial genome-wide association study (GWAS) tools often require manual data processing steps, lack comprehensive workflows, and are limited by scalability issues, thus hindering the exploration of ...
doi.org
BaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies
Charles Wei