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In #GENETICS, @jazlynmooney.bsky.social and the team present a unified theoretical framework for understanding how recombination shapes ancestry patterns after admixture. 🔗 buff.ly/7i4EFAc
11d
🚀 We are introducing PerturbPair (with Taka Kudo) — a platform that combines parallel Perturb-seq and optical pooled screening (PerturbView) in primary cells to systematically map at massive scale how genetic perturbations reshape cellular states across modalities. www.biorxiv.org/content/10.6...
Genetics Society of America
got my concluding slide on challenges with estimating ancestral recombination graphs ready for PEQG
10d
16d
postdoc alert 🚨! NIH-funded postdoc in my lab to work on Ancestral Recombination Graphs in space. Please spread the word widely in your networks, and please reach out if you're interested! (2-3yr position, start date flexible, pay/benefits good!). details here: careers.umich.edu/job_detail/2...
We built a joint experimental and computational platform for scalable multi-modal single-cell chemical screens — profiling RNA, protein (including phospho-signaling), and chromatin accessibility responses to thousands of small molecule perturbations in parallel. www.biorxiv.org/content/10.6...
19d
19d
The 2026 Genomic History Inference Strategies Tournament is live! ghist.bio Today was the kickoff tutorial at the Modeling and Theory in Population Biology workshop at @icerm.bsky.social . Looking forward to summer workshops at PEQG @genetics-gsa.bsky.social and at SMBE @official-smbe.bsky.social .
16d
Multiple positions available: ​ Postdoc PhD students
www.genescape.org
recruitment
Romain Lopez
Romain Lopez
Gideon Bradburd
16d
Check out our new paper presenting pg-gpu, a GPU-accelerated population genetics python package: www.biorxiv.org/content/10.6... 1/3
Ryan Gutenkunst
Jeffrey Ross-Ibarra
Come see my poster tn! For 3 yrs, populations evolved at 43 sites worldwide. I built kMate, an alignment-free, pangenome k-mer method to track SNP & SV frequencies across space & time, opening the door to accurately and efficiently mapping climate-adaptive variants on evolution experiments! #PEQG26
6d
www.biorxiv.org
JIT 4 summer, the latest preprint from our lab, brilliantly led by @kaitezhang.bsky.social w/ support from Collepardo lab (@juliamaristany.bsky.social / @janhuemar.bsky.social). www.biorxiv.org/content/10.6... describes a new single-molecule epigenomic method, & discoveries it enables ... (1/n)
8h
Nucleosome spacing influences higher-order chromatin fiber organization in vitro but how this relates to cellular chromosome structure remains contentious. To address this, we developed Ligation Analy...
www.biorxiv.org
Single-molecule nucleosome spacing coordinates chromatin fiber interactions
#PEQG26 folks! I will be presenting my postdoc project with @jkpritch.bsky.social and @jeffspence.github.io about inferring population structure dynamics over time with tensor decomposition on ARG. The talk will be at the James Crow Talk session on Wednesday. Look forward to seeing everyone there!
8d
Murillo R.
Tatiana Bellagio
Vijay Ramani
Yun Deng