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I'm actively developing a Python 3 rewrite that will be installable via PyPI and conda. The goal is to make Dip-C even easier to use!
github.com/tanlongzhi/d...
One thing I'm doing since joining the Tan Lab @ Stanford is working on the computational stack of 3D genome research. I put Dip-C v1.0 out as a release! This is an archive of the original Python 2 code from the single-cell 3D genomes in Science, Nat Struct Mol Biol, and Cell (2018–2023). 🧬
3mo
3mo
3mo
Darrin T. Schultz
Darrin T. Schultz
Darrin T. Schultz
Final version @nature.com of our paper describing unconventional multicellular development in a choanoflagellate inhabiting an extreme environment. A ton of new data since the first @biorxivpreprint.bsky.social preprint (which we've kept updating). A brief 🧵 (carried over from the old place)
Even more excited — our paper is featured on the cover of Science Advances! Huge thanks to @alexandrejan.bsky.social who took this incredible photo of a ctenophore (aka comb jelly) and the editors. Here’s the cover 👇 www.science.org/doi/10.1126/...
3mo
3mo
Stay tuned for more updates in the coming weeks. 🙂
3mo
A little late, but there is a fun new chapter in my life! I joined Longzhi Tan's lab at Stanford Neurobiology in November, and am now working on single-cell 3D architecture, neurodegeneration, and aging. Excited to bring a comparative genomics perspective to these topics. 🧬 Tan lab: 3dgeno.me
Darrin T. Schultz