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1/ 🚀 Pathoplexus now supports Bundibugyo virus (BDBV), a species of Ebolavirus. BDBV has been associated with past outbreaks of Ebola in the DR Congo and Uganda, & a case has been reported today during response to the current Ebola outbreak. pathoplexus.org/ebola-bdbv #ebola #bdbv #ebolaoutbreak
Our BDBV resources include guidance on bioinformatic analysis for amplicon data and bait capture, and for data sharing using @pathoplexus.org artic.network/viruses/bdbv...
26d
Rapid release of multiplex PCR amplicon scheme for Andes hantavirus whole genome sequencing validated on control material: www.biorxiv.org/content/10.6... @scalene.bsky.social @stevepullan.bsky.social @ukhsa.bsky.social output from HPRU in Public Health Genomics
9d
25d
9d
ARTIC network has published Bundibugyo (BDBV) sequencing resources as the 2026 outbreak continues in DRC & Uganda. We have compiled guidance for labs wishing to sequence, assemble and analyse BDBV genomes: artic.network/viruses/bdbv/bdbv-sequencing-guide.html
artic.network
Bundibugyo virus genomic sequencing resources | ARTIC network - pathogen genomics from sample to response
With lab work done, sequencing and bioinformatics made up the final days of the @artic.network workshop in Ghana
The Viral Sequencing and Bioinformatics workshop in Accra, Ghana is underway! @artic.network
artic.network
2mo
2mo
Bundibugyo virus genomic sequencing resources | ARTIC network - pathogen genomics from sample to response
www.biorxiv.org
Pathoplexus
ARTIC network
ARTIC network
Nick Loman
Various sequencing approaches work for BDBV: amplicon panels (BDBV-specific v1.0.0 & pan-Ebola v2.0.0), bait capture (Twist/Illumina), or metagenomics. Primer schemes are available via labs.primalscheme.com and are being synthesised for free distribution on request via the new ARTIC Primer Foundry
9d
Bede Constantinides
Bede Constantinides
The ARTIC Primer Foundry is now live and will soon begin shipping BDBV primers on request primalscheme.com/orders
ARTIC network
9d
labs.primalscheme.com
primalscheme.com
PrimalScheme is a tool for designing primer panels for multiplex PCR. It uses a greedy algorithm to find primers for tiling amplicon generation for multiple reference genomes.
23d
Initial genomic characterization of the Bundibugyo virus outbreak in Eastern DRC with cases in Uganda. Join work between INRB in DRC and CPHL in Uganda plus many partners. virological.org/t/initial-ge...
PrimalScheme: primer panels for multiplex PCR