Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Michael Love
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Jeremy Wang developed rammap, a minimap2 rewrite in Rust. It achieves comparable or better performance than minimap2 and produces identical output to minimap2. During rewrite, Jeremy found two long-existing bugs in minimap2 which are fixed in v2.31. www.biorxiv.org/content/10.6...
#rustbio 4.0 has been released. It harmonizes the error handling, improves the API, makes gap-open/extend behavior in pairwise alignment more intuitive and in-line with the literature, improves GFF parsing, and allows incremental building of the rank-select datastructure. github.com/rust-bio/rus...
If you don't know David Hockney, check out his work. I especially love the winter -> spring transitions with a focus on light
www.biorxiv.org
4.0.0 (2026-06-12)
⚠ BREAKING CHANGES
Replace anyhow with typed thiserror errors (#674)
Change Phase conversion methods to use TryFrom for better error handling (#625)
for pairwise alignment, only...
Very excited to share our new review on the complexity of SMA genetics, now online @cp-trendsgenetics.bsky.social!
General interest in complex genetics? Want to know more about long-read sequencing? Segmental duplications? ✅✅✅
Have a look!
www.cell.com/trends/genet...
Having a visual component when you are teaching a new concept is always something I value. I went back and redid some old diagrams as animations
This website has all mp4, gif and code for you to use yourself in slides of websites!
emilhvitfeldt.github.io/tidy-animati...
#rstats #quarto #dataBS
