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Deacon can now run in the browser using WebAssembly. Sequence data never leaves your machine. It currently supports FASTA/Q filtering using indexes up to 1GB in size. Demo: bede.im/deacon
3mo
Congrats to @leoackermann.bsky.social on winning RECOMB's best poster award for his work on compressing pairwise distance matrices! Check it out here: lacker.gitlab.io/pdf/research...
15d
Next year in march, the 2nd #Snakemake hackathon, this time at the #TUMunich in Germany, will take place. If you are interested in participating, follow the link on snakemake.github.io and check out the details!
Kamila Szewczyk, Sven Rahmann: Hecate: A Modular Genomic Compressor https://arxiv.org/abs/2603.15390 https://arxiv.org/pdf/2603.15390 https://arxiv.org/html/2603.15390