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Moritz Kramer & colleagues discuss global approaches to infectious disease analysis and modelling, emphasizing federated approaches and addressing challenges in data interoperability, equity, & trust. Part of our Focus issue on #infectiousdiseases.
Thinking about how this might go Listener: My chains aren't converging Andrew: Your model is bad Aki: Your parameterization is bad Richard: The Buddha teaches us that numerical integration is suffering
ESCMID 2026 highlights COBRA Trial – One day is enough Dutch RCT: 1 day of antibiotics after ERCP drainage for cholangitis was non‑inferior to 4–7 days. Bottom line: Antibiotic durations can safely be much shorter once source control is achieved. #IDSky clarityinitiative.org/escmid-2026-...
New research article Emergence of carbapenemase-producing #Escherichia coli in acute care hospitals in 32 European countries (the CCRE survey) www.thelancet.com/journals/lan... #IDSky #ClinMicro #AMR #Ecoli #OpenAccess #OA
😀 Enter the amortized Bayesian workflow from here 👉 pipme.github.io/amortized-Ba... Huge thanks to my great collaborators: @avehtari.bsky.social, @paulbuerkner.com, @stefanradev.bsky.social, @lacerbi.bsky.social, @marvin-schmitt.com!
Expanding the Stan User’s Guide statmodeling.stat.columbia.edu/2026/05/04/e...
Maybe we shouldn't let a black-box AI product decide who gets to become a board-certified physician... ?
🧪 #IDsky #immunology #GlobalHealth This obituary and tribute to #mensch Barry Bloom is uplifting and beautiful - an extraordinarily complete scientist and person Thank you @yhgrad.bsky.social and Marc Lipsitch This link is #FreeToRead via @archive.org archive.ph/LfUO3
"Tell me who your friends are, and I’ll tell you who you are." It turns out, microbes follow the same rule! Very proud to share our lab's new paper in @natmicrobiol.nature.com showing that bacteria don't just respond to their environment, they respond to each other. www.nature.com/articles/s41...
Very pleased to see this work published. We analysed the oral microbiomes of children with noma and found that previously uncharacterised Treponema bacteria were both prevalent and highly abundant. journals.plos.org/plosntds/art...
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This Review discusses global approaches to infectious disease analysis and modeling, focusing on federated methods and addressing long-standing challenges in data interoperability, equity and trust.
dlvr.it
Clinical Literature Appraisal and Research education in InfecTious diseases
clarityinitiative.org
Global approaches to infectious disease surveillance and modeling - Nature Medicine
Clarity Initiative
statmodeling.stat.columbia.edu
Expanding the Stan User’s Guide | Statistical Modeling, Causal Inference, and Social Science
Community context reshapes microbial proteomes and reduces functional overlap - Nature Microbiology
Biotic interactions modulate protein abundance, reducing functional redundancy and increasing productivity in complex bacterial communities.
www.nature.com
Shotgun metagenomic analysis of the oral microbiomes of children with noma
Author summary Noma is a rapidly progressing necrotic disease that destroys the tissues of the mouth and face, mainly affecting children living in abject poverty. Although antibiotic treatment can be ...
journals.plos.org
Amortized Bayesian Workflow
Adaptive Bayesian workflow combining amortized inference with PSIS and MCMC diagnostics.
pipme.github.io
Nature Medicine
Richard McElreath 🐈‍⬛
Steven Tong
Chengkun Li
The Lancet Microbe