Senior Research Specialist (IR) @inrae-bfp.bsky.social
Gene Expression #genomics #transcription #chromatin #bioinformatics #rstats
Now working on polyploid cells in tomato 🍅
Formerly on 🌱 (Arabidopsis), 🍄 (Penicillium) , 🪰 (Drosophila), and 🐀 (Mouse)
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Pascal Martin follows at the #SOLRUB2025 with a presentation about endopolyploidy in #tomato fruit development. Endoduplication increases transcription. Changes in the chromatin accessibility contribute to ploidy-specific gene expression changes.
🎉 Congratulations to Loé Malgouyre on successfully defending her CIFRE PhD on Feb 20th!
🔬Her research explored the effects of Leafamine®, an animal protein-derived biostimulant, on tomatoes under heat stress. Supported by BCF Life Sciences & #FDFE teams.
Bravo, Loé! 👏👩🎓
This week we’ve had the pleasure to host @pgpmartin.fr @inrae-bfp.bsky.social to launch our pilot CUT&RUN experiment on Medicago nodules! 🌱 Thanks for sharing your expertise with us, Pascal 👨🔬 and thanks @tulip-gs-labex.bsky.social for funding 🙏
#Formations #bioinfo & #biostat 2025 !
(certaines déjà complètes)
R, Seurat, ggplot2, mixOmics, machine learning, ASTERICS, RNAseq... Modules IA pour la #génomique avec Python 🧬
☑️ Attestation fournie
☑️ Déj’ & café inclus
☑️ À partir de 150€/jour (académiques)
🔗 Pré-inscriptions : bit.ly/3ZvwHKd
Aureliano Bombarely
🤓🌱 Two of our excellent PhDs, Loé and Emilia, took part in the “Tête Chercheuse” day at a secondary school in Dordogne
This event, organized by @univbordeaux.bsky.social and @capsciences.bsky.social , aims to promote the role of women in science and inspire the next generation of scientists. 👏👩🎓👩🔬
Preprint on hifiasm Nanopore-only assembly. Led by Haoyu Cheng: www.biorxiv.org/content/10.1...
📸 Here is the new group pic from the #FDFE team!
Taken during our team building day 2025 @capsciences.bsky.social
A great day of warmth, sharing and good vibes 🍃🤝
It strengthened team spirit and helped colleagues, new and old, get to know each other better✨
#FDFE #INRAE #Bordeaux
Quelques 📸 des Journées Jeunes Chercheur·e·s du département BAP, à Bordeaux 14-16 mai
Organisées par un comité local, elles ont permis de mettre en valeur les travaux scientifiques des doctorant·e·s et postdoc via des présentations orales, posters, échanges scientifiques et moments de convivialité 👏
Un poste de MCF des Universités en "Génétique quantitative appliquée aux espèces végétales" est ouvert au concours 2026 pour l'Université de Bordeaux.
Projet de recherche axé sur "Déterminants génétiques de la résilience des céréales aux stress multiples".
Laboratoire BFP - Département SE (UB)
Several members of the #FDFE team participate in the #SolRub2025 meeting in Torino, Italy this week. 3 talks and 3 posters presented. Stimulating meeting gathering specialists of the Solanaceae and Rubiaceae communities.
Telomere-to-telomere (T2T) assembly is the ultimate goal for de novo genome assembly. Existing algorithms capable of near T2T assembly all require Oxford Nanopore Technologies (ONT) ultra-long reads w...
