Interested in fast & non-equilibrium dynamics of within-host pathogen populations? Read our paper just published by @FrontiersIn Microbiology:Associated R code to simulate such dynamics coupling viral kinetics and microevolution:
doi.org/10.5281/zenodo… doi.org/10.3389/fmicb.…
High-throughput sequencing has opened the route for a deep assessment of within-host genetic diversity that can be used, e.g., to characterize microbial comm...