Was incredible to work with Arushi during her summer internship - check out her preprint showing that single cell representation learning methods for microscopy can be confounded by cells in the background of their inputs!
Alex Lu
This work began from a summer internship at @msftresearch.bsky.social New England. Incredibly thankful to mentors @alexijie.bsky.social and Alan Moses, whose deep involvement and guidance made this possible!
📄: www.biorxiv.org/content/10.1...
💻: tinyurl.com/microscopy-c...
Deep learning models are widely used to extract feature representations from microscopy images. While these models are used for single-cell analyses, such as studying single-cell heterogeneity, they t...
