5/6 We wanted the workflow to be reproducible and easy to install and setup across different HPC systems. That's why we chose to code it in Nextflow, and make use of a containerised approach. Check out what else is needed to run it on the Github readme and wiki: github.com/NathanACO/me...
Metagenomic Pipeline for ancient DNA analysis performed at the Centre for Palaeogenetics - Stockholm - NathanACO/metaJAM