Associate Professor at Cold Spring Harbor Laboratory. Neuroscientist. Loves explaining. Bibliophile. Amateur singer. Eternal optimist. Writes the occasional paper. Lab website - www.arkabanerjeelab.com
Arkarup Banerjee
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Made a starter pack for attendees of the Neural Mechanisms of Acoustic Communication Gordon Conference. I'm sure I've missed people so let me know!
go.bsky.app/57Ln8Bk
New from the lab: BARseq3!
Barcodes + high efficiency spatial transcriptomics and translatomics in the same cells, or just a nice spatial transcriptomics assay. All in a modular, expandable system to enable truly multimodal measurements. Check it out:
www.biorxiv.org/content/10.6...
On central circuit control from my lab, in collaboration with @tonyzador.bsky.social
www.nature.com/articles/s41...
At CSHL, Gabrielle Pouchelon and Dimitri Dumontier reveal how Fragile X disrupts brain wiring, offering hope for autism. bioRxivpreprint #AutismAcceptanceMonth #FragileX #InspiringDiscovery #ScienceMakesLifeBetter
Do you record multimodal data? For our experiments with the singing mice, @cshlnews.bsky.social graduate student @xmikezheng20.bsky.social set up a fantastic acquisition pipeline, which has now become THE standard for all rigs in my lab. He published a detailed protocol today! Check it out. 👇
www.biorxiv.org
And some popular science coverage about our manuscript. www.nytimes.com/2026/05/06/s...
www.cshl.edu/what-can-sin...
How did singing mouse evolve its song? Two research manuscripts published today shed light on peripheral and central circuit modifications underlying this novel vocal capacity.
What did the brain say to the face? Say cheese—Cheese3D that is! See the new discovery platform from CSHL’s Helen Hou, Kyle Daruwalla, and Irene Nozal Martin.  https://www.cshl.edu/say-cheese3d-a-new-model-for-tracking-facial-expression/
Latest on the sound production mechanism and laryngeal adaptions from @evolbrain.bsky.social, Michael Long, Coen Elemans, Sam Smith and others. royalsocietypublishing.org/rspb/article...
Arkarup Banerjee
Arkarup Banerjee
Justus Kebschull
Arkarup Banerjee
Arkarup Banerjee
Arkarup Banerjee
High-throughput barcoded neuroanatomy of two closely related rodent species with divergent vocalizations reveals differences in long-range projection motifs in the brain that may s...
I’m happy to share a protocol we’ve been working on for building modular, synchronized multimodal data acquisition systems for systems neuroscience behavior rigs. @mbd1mbd1.bsky.social @arkarupbanerjee.bsky.social
dx.doi.org/10.17504/pro...
dx.doi.org
A modular toolkit for synchronized multimodal data acquisition in systems neuroscience. Animal behavio. Read full protocol, steps, and materials on protocols.io
