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Kiln (0.2.1) is part of the ecosystem. The project was accepted to the OME-NGFF tools registry. It's now a recognized viewer for OME-Zarr datasets alongside other established tools from this domain. Thanks @ OME community for the listing. ngff.openmicroscopy.org/resources/to... #webgpu #ome-zarr
25d
🎬 Just dropped: our latest video! If you’re new to volume EM, a non-scientist, or a scientist from another field, this video is a great place to start. #vEM #volumeelectronmicroscopy #volumeemcommunity www.youtube.com/watch?v=jJmW...
4mo
Martin Panknin
Try it out: GitHub: github.com/opengeos/geoai Notebook example: opengeoai.org/examples/geo... #geospatial #geoai #opensource #python
2mo
Small update from Kilian. Kiln (0.2.0) now supports local filesystem streaming, auto-leveling from dataset metadata, improved OME-Zarr handling (v0.5 uint8/unit16) and a few improvements on the UI. github.com/MPanknin/kil... #webgpu #volume-rendering #ome-zarr
2mo
VolumeEM
Volumetric exploration of multi-resolution CryoET data in native WebGPU. Kiln (0.3.0) adds float32 support, OME-Zarr v0.4, slice views and more. github.com/MPanknin/kil... Vibrio cholerae tomogram from CryoET Data Portal. cryoetdataportal.czscience.com #WebGPU #OME-Zarr #CryoET
Kiln also has experimental OME-Zarr support. This is the Beechnut — a 3 GB micro-CT scan streamed directly from a public OME-Zarr store into the browser. No preprocessing, no conversion. github.com/MPanknin/kil... #WebGPU #OMEZarr #VolumeRendering
Small update from Kilian. Kiln (0.2.1) is now available on npm. I refactored the internals into what I’d now consider a stable and usable API surface and published the initial package. New official address of our friend Kilian: www.npmjs.com/package/kiln... #webgpu #volume-rendering #ome-zarr
17d
2mo
1mo
Video
Martin Panknin
Martin Panknin
Martin Panknin
Martin Panknin
Qiusheng Wu
ngff.openmicroscopy.org
Tools — NGFF documentation
GeoAI: Artificial Intelligence for Geospatial Data - opengeos/geoai
github.com
GitHub - opengeos/geoai: GeoAI: Artificial Intelligence for Geospatial Data
YouTube video by Volume EM Community
Overview of Volume Electron Microscopy
www.youtube.com
Video
The new release of #BigVolumeBrowser (0.1.0) finally adds animation render functionality to it, plus some other navigation improvements and bug fixes. Here is a movie I've made for the microtubule network (via ExM) in different cell types. Contact me if you want it for educational/research purposes.
2mo
Eugene Katrukha 🇺🇦
New release of #BigVolumeBrowser (0.1.1) adds support for (multiscale) OME-Zarr (thanks to libraries from @bogovicj.bsky.social, Stefan Hahmann, Vladimir Ulman). And midi gizmo navigation (from @herrsaalfeld.bsky.social ), shown below.
22d
Video
Eugene Katrukha 🇺🇦
Video