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Now also on arxiv arxiv.org/abs/2606.01190
12d
In recent years, there has been a renewed interest in the search for low density minimizer schemes. These schemes take a window of $w$ consecutive $k$-mers, and sample one of them: the smallest under ...
The anti-lexicographic SUS-anchor: a near-optimal k=1 sampling scheme
arxiv.org
Ragnar {Groot Koerkamp}
My WABI submission: anti-lexicographic SUS-anchors. For sigma=4, this selection scheme (a k=1 sampling scheme) has density within 1% of the lower bound! The idea: find the smallest* substring that does not have a 2nd occurrence, and sample its start pos. curiouscoding.nl/posts/sus-an...
22d
Ragnar {Groot Koerkamp}