Head, computational multi-omics at Flinders University. Sci-fi, history and video games nerd 🤓👾
Feargal Ryan
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Our database includes sets from BugSigDB, GMRepoV2, gutMGene, mBodyMap, MiMeDB and BacDive and some manually curated from the literature.
These capture disease signatures, body-site associations, microbe–metabolite links and microbial traits.
You can also define custom sets.
Feargal Ryan
If anyone waiting for NHMRC to announce investigator grants can tolerate a LOTR joke
We are delighted to announce that #ABACBS2026 will be held at RMIT, Melbourne CBD campus from 16th to 20th November 2026. Big thanks to A/Prof. Sonika Tyagi and team for leading this years organising! More details and official conference launch to follow! #bioinformatics @combine1.bsky.social
@wytamma.bsky.social 's WASM tools have transformed my experience of teaching Python to first year undergraduate biologists this year. Since last year, I've been teaching ~400 undergrads how to code (functions, lists, dictionaries, loops) over (one hour intro lecture +) two 2-hour practicals. 1/n
Pesticides may wreak havoc on the gut microbiome
Disruption of intestinal ecosystem could contribute to diabetes & other health issues, scientists say
I enjoyed discussing our research on the impact of pesticides on the microbiome with Sanket Jain for @science.org
www.science.org/content/arti...
Andrew Baillie
I’ve been maintaining a list of shotgun #metagenomics tools and resources which I got Claude to turn into a GitHub repo. It has 300+ entries.
Please share and tell me if I’ve missed anything!
github.com/feargalr/Met...
#microbiota #bioinformatics #microbiome #genomics
Very interesting read. www.asimov.press/p/bioinforma... (Thanks to @torstenseemann.bsky.social for sharing over on the #ABACBS slack)
