Context Lab (@contextlab.bsky.social) director, Dartmouth prof, memory & 🧠 network modeler, data scientist, dad x2, husband, tree hugger 🌲, & 🧁+🍪 baker
https://www.context-lab.com
Jeremy Manning
Loading...
Just hit a ten year streak on @duolingoverde.bsky.social!
¡Gracias por enseñarme español!
Having seen that weird behavior emerge — and now seeing the patch for it, gives me a horrible insight into what it’s like to build these things.
You’re trying to grow a tree, but the trunk is floppy, and has to be staked. Also all the branches have to be wired or they’ll twist in odd directions.
Victory favors those who follow the science.
Neuromatch has been denied our Office of Foreign Assets Control "Iran license" renewal. We had renewed successfully before, but now our request is “inconsistent with current U.S. foreign policy.”
I am absolutely gutted by this denial.
Check out our latest collab with Manish Saggar, @richardfbetzel.bsky.social, et al. (lead: Chunyin Siu)!
We use TDA to show that 2nd-order (edge) brain interactions more distinctly segregate task connections than other kinds of network patterns.
Paper/code/data: www.biorxiv.org/content/10.6...
The @nasonline.org has elected @dartmouthpbs.bsky.social professor James Haxby as a member, recognizing his distinguished research in computational cognitive neuroscience, including how thoughts and perceptions can be decoded from brain activity patterns.
I don't know whether it was staged or not. I DO know he & his regime are a disgrace to this country & will live in infamy long after they all face charges, are convicted & imprisoned.
History is written by dispassionate scholars baed on facts, not MAGA cult-members completely divorced from reality.
Systematically dismantling every policy and national landmark to shape them in his warped image: www.nytimes.com/2026/04/23/u...
I love this! The "draw a fictional animal" task. www.biorxiv.org/content/10.6...
Jeremy Manning
Ted Underwood
Functional connectivity in network neuroscience is traditionally characterized using time-averaged correlations between brain regions. While these summaries capture stable large-scale organization, they do not fully reflect the temporal structure of moment-to-moment interactions. Here, we investigate how the order of interaction used to represent brain dynamics shapes the organization recovered from neural data. We compare three interaction representations of fMRI dynamics: regional activation (node time series), pairwise co-fluctuations (edge time series), and higher-order triplet interactions (triangle time series); within a common topological framework using Mapper from topological data analysis (TDA). Across task and resting-state data, Mapper representations derived from pairwise co-fluctuations more distinctly segregate task conditions than activation-based or higher-order representations. This organization reflects structured coordination patterns beyond activation polarity and is driven by high-amplitude interaction events. Beyond task states, modularity quality computed across all Mapper representations is highest for edge time series and selectively associated with stable individual differences: higher modularity relates to higher conscientiousness and lower internalizing and externalizing symptom dimensions. Together, these findings suggest that behaviorally relevant information is reflected in the topology of moment-to-moment brain interactions. Topological analysis of interaction-level dynamics therefore provides a complementary and interpretable framework for linking large-scale neural coordination to cognition, personality, and mental health. ### Competing Interest Statement The authors have declared no competing interest. National Institute of Mental Health, https://ror.org/04xeg9z08, MH127608 Stanford Maternal and Child Health Research Institute, https://ror.org/00yt0ea73, Faculty Scholar Award
www.biorxiv.org
Q: Does my thesis adviser pick the snake?
A: No. Your adviser just tells the guy who picks the snakes how good your thesis was.
We have difficult news to share.
Neuromatch's Office of Foreign Assets Control (OFAC) license renewal, which has allowed us to include participants residing in Iran since 2020, has been denied by the United States Government.