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The main challenge was extending pandera-based schema validation to the complicated structure of SpatialData; Parquet and AnnData are easier! Blog: blog.lamin.ai/spatialdata Code: github.com/laminlabs/la... With @lukasheumos.bsky.social and many others!
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Managing spatial omics datasets with SpatialData & LaminDB: Spatial omics technologies — Xenium, Visium, MERFISH, seqFISH, and others — are generating datasets that combine molecular profiling ...
blog.lamin.ai
Managing spatial omics datasets with SpatialData & LaminDB
Alex Wolf