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PhD student in Statistical Bioinformatics at the University of Zurich and the Swiss Institue of Bioinformatics
Samuel Gunz
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Orchestrating Spatial Transcriptomics Analysis with Bioconductor https://www.biorxiv.org/content/10.1101/2025.11.20.688607v1
This was a fun effort from our lab retreat (!) to recreate a "arms-length" benchmark (i.e., one that someone else created) using our Omnibenchmark framework. We all learned a lot in the process ..
Huge thanks to @helucro.bsky.social and @markrobinsonca.bsky.social for great collaboration and supervision, and to the Robinsonlab and the @bioconductor.bsky.social community for valuable feedback throughout this project! Feedback on the manuscript and package is welcome and much appreciated!