So I built a small tool that merges Allen CCFv3 with the traditional bregma-relative coordinate system (calibrated with Paxinos & Franklin's Atlas). Click any coronal or sagittal section, and get coordinates instantly.
bohanzhao.com/Atlas
Hope it saves someone a headache 🐭
Hopefully one day I can say the same thing
Free interactive tool: enter bregma-relative AP/ML/DV coordinates to navigate Allen Mouse Brain Atlas coronal and sagittal sections. Brain regions identified in real time.
This is my 25th year running a lab. 7 students earned a PhD, and 31 postdocs trained with me. Remarkably, 37 of 38 trainees are in science, and 36 do research! Nick Villarino, the 8th student, defends in December, with my 1st student, Lindsey Macpherson, as external examiner. I appreciate them all!
