Vet. Epidemiology, public health and genomics enthusiast. Nanopore fan. Cactus obsessed.
Chiara Crestani
Such a privilege to be part of this as member of the @eurl-ph-dipe.bsky.social! Thanks @ecdc.europa.eu!
🔷 Mais quel rapport entre l'Institut Pasteur et les popcorn ?
C'est le nom de l'étude à laquelle vous pouvez participer de façon anonyme !
What drives the K. pneumoniae species complex (KpSC) to thrive from hospitals to soils? In this study, we investigate how pangenome structure and functional diversity shape KpSC adaptability across phylogenetic and ecological contexts. (Thread)
www.biorxiv.org/content/10.6...
Chiara Crestani
Almost there! Starting tomorrow morning (Paris time), the webinar on Bacterial strain Taxonomy for Genomic Surveillance organized within the ECDC sponsored GenEpi-BioTrain programme; registration is free; see more here: research.pasteur.fr/en/event/bac...
A novel version of diphtOscan is available at gitlab.pasteur.fr/BEBP/diphtos.... v2.2.0 makes it easy to install on local computers. diphtOscan scans genomes and extracts information including #diphtheria toxin and antimicrobial resistance genes, biovar, species and subtyping information.
First day of the second Meeting of the Network of EURLs for Public Health at the @ecdc.europa.eu headquarters! @eurl-ph-dipe.bsky.social
Huge preprint if you are interested in bacterial strain taxonomy! The why and how of cgMLST LIN codes: An extensively revised and expanded version doi.org/10.1101/2024... I will summarize it for you in this thread 👇
🧫 Our publication,“Global perspectives on Klebsiella epidemiology and biology: conference report on the KLEBS 2024 symposium,” is now out!
📄 Link to paper: www.nature.com/articles/s44...
@kelwyres.bsky.social @katholt.bsky.social @sylvainbrisse.bsky.social @pasteur.fr
Jose F. Delgado-Blas
🚨 Last few days to register for our Nanopore Users Day 2026!
Registration is free but mandatory, as places are limited, don’t miss out!
Join us for a day of scientific exchanges and networking focused on ONT sequencing and its applications!
@chloebaum.bsky.social @pasteur.fr @nanoporetech.com
📢 Save the Date!
The 2nd Nanopore Users Day will take place 🗓️10 March 2026 at the Duclaux Amphitheater, Institut Pasteur (Paris). This edition will be open to external participants!
👉 More details and registration info coming soon!
@chloebaum.bsky.social @pasteur.fr @nanoporetech.com
VLS Vaccination et Lien Social
sylvain Brisse
sylvain Brisse
Unified strain taxonomies are needed for the epidemiological surveillance of bacterial pathogens and international communication in microbiological research. Core genome multilocus sequence typing (cg...
We’re hosting a group of microbiologists today at #ECDC.
They’re a lot bigger than we expected.
🧪
#EpiSky #IDsky
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www.nature.com
European Centre for Disease Prevention and Control
📢 Registration for the Nanopore Users Day 2026 is now OPEN!
Registration is free but mandatory
🗓️ 10 March 2026
📍Institut Pasteur Paris
Make sure to secure your spot, see you there!
👉 www.eventbrite.com/e/billets-na...
@chcrestani.bsky.social @pasteur.fr @nanoporetech.com @nebiolabs.bsky.social
research.pasteur.fr
This workshop aims to provide participants with a comprehensive understanding of bacterial classification and nomenclature approaches used in genomic surveillance. Participants will gain insight into ...
