What makes bird flu spill over to humans? 4y funded PhD in the genomics and molecular virology behind zoonosis of avian influenza A virus, working with @tompeacock.bsky.social and others between Liverpool, Pirbright, and Uppsala!
open to applications until next week!
In collaboration with Nicola Muller, and led by @lambod50.bsky.social, we have a new preprint out that's all about reassortment! www.biorxiv.org/content/10.6...
Using TargetedBeast, we built massive (9000 tips!) Bayesian phylogenies of North American H5Nx viruses, and inferred the host...
Our lab's first paper is out! Led by Jordan Ort, we developed NextClade datasets that enable rapid H5 clade assignment via NextClade. We deployed these during the start of the H5 cattle outbreak, and we finally published the paper in Virus Evolution academic.oup.com/ve/article/1...
Our paper on the Genomic Epidemiology of DENV2/3 in Colombia and the Americas is finally out @cp-cellreports.bsky.social, check it out: www.sciencedirect.com/science/arti...
Big thanks to my collaborators @lambod50.bsky.social, @viralverity.bsky.social, @nathangrubaugh.bsky.social, and many others!
Check out this awesome work on reassortment in Hantaviruses headed by @ricardoriveroh.bsky.social and @punkrockscience.bsky.social. Great privilege to be involved!
Check out this cool preprint on Dengue epidemiology in Colombia! It was a pleasure to work with Ricardo on some of these interesting phylodynamic analyses!
Check out the preprint of a project I had the pleasure of working on with Nicola Mueller and Louise Moncla on North American H5 reassortment! Feel free to reach out with questions or thoughts!
Amidst all the craziness in the world it's great to see folks like Dr. Legall providing critical perspectives on microbiology and the state of science. Please consider subscribing! substack.com/@noahlegall?...
Important work from Tavis Anderson and our Penn-CEIRR USDA colleagues:
www.science.org/doi/10.1126/...
Abstract. The 2022 panzootic of highly pathogenic avian influenza (HPAI) A(H5) viruses has led to unprecedented transmission to multiple mammalian species.
I write about Bioinformatics and Microbiology. Follow along as I develop these ideas using AI/ML
substack.com
Frequent seasonal reassortment between high and low path viruses drives the diversification of influenza A/H5N1 https://www.biorxiv.org/content/10.64898/2026.04.17.719307v1
Dengue fever, a major mosquito-borne viral disease, is transmitted by Aedes mosquitoes and poses a significant global health burden. Despite extensive…
