It is great to now have a proper way to cite pileupCaller! The code to generate pseudohaploid genotypes from BAMs is one of the most quoted github code chunks in human ancient DNA research.
Harald Ringbauer
Finally an official publication of Pileupcaller. Please cite. Thanks to @joss-openjournals.bsky.social for the review process and publishing!
Stephan Schiffels
Just published in JOSS: 'PileupCaller: A command-line tool to sample genotypes from low-coverage sequencing data of ancient DNA' https://doi.org/10.21105/joss.08634
