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We are pleased to announce the publication of panREPET, a pipeline that identifies TE insertions shared by groups of individuals. By Saidi, Blaison, del Pilar Rodríguez-Ordóñez, @johannconfais.bsky.social, @hquesneville.bsky.social 📖 doi.org/10.1186/s130...
Background The role of transposable elements (TEs) in host adaptation has gained interest in recent years. Individuals of the same species undergo independent TE insertions, providing genetic variabil...
doi.org
A reference-free pipeline for detecting shared transposable elements from pan-genomes to retrace their dynamics in a species - Genome Biology
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BioinfOmics INRAE