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Sorry, to be clear, the preprint is new - tool has been out for some time now and we've given it a thorough test-drive ourselves over the last few months
2mo
Happy to share that the paper describing Autocycler is now 100% up: doi.org/10.1093/bioi... (1/3)
8mo
Sean McKenzie
2mo
Myloasm, our long-read metagenome assembler, is now published! w/ @mgmarin.bsky.social and @lh3lh3.bsky.social Very rewarding after > a year of development and countless hours thinking about assembly. Thanks to beta testers, Li lab, and reviewers who gave very helpful feedback. rdcu.be/famFj
The most satisfying genome assembler to run, ever. Huge appreciation for the team behind hifiasm 👏
4mo
We can’t wait to welcome you back to Old Billingsgate! Early bird tickets for London Calling 2026 are now available to purchase! Buy yours before 1st Jan and be a part of the biggest Oxford #Nanopore sequencing event of the year. Click here for tickets: https://bit.ly/4ouoqzR
6mo
Nature Biotechnology - A long-read metagenome assembly method recovers circular and complete genomes better than existing tools.
rdcu.be
High-resolution metagenome assembly for modern long reads with myloasm
Ryan Wick
New tool from Heng Li lab, offering amazing accuracy for SVs even in low complexity regions (also incredible SNPs/Indels for a deeplearning-free approach)
plsRT: Looking for a motivated postdoc! Join us at @bcmhgsc.bsky.social to explore the mosaic & somatic landscape of the human genome: structural variants, methylation, and all things @smahtnetwrk.bsky.social If you like long reads, complex variants & methylation come talk to me!
2mo
7mo
Trio-barcoded @nanoporetech.com Adaptive Sampling (TBAS) to improve #RareDisease diagnostic at less than 1/2 the $$ & high cov: 76% solve rate across 13 trios inc. two corrections from prev. diagnosis. www.medrxiv.org/content/10.1... @gregor-research.bsky.social @bcmhgsc.bsky.social #Research
Released today: ~1.5 Tbp of ONT metagenomic sequencing from compost. Assembly, MAGs, and downstream analysis are available to play with epi2me.nanoporetech.com/compost_mgx_...
ONT has a temporary bioinformatics position (8 months) open while I'm on maternity leave. Focus will be on microbial genomics but with opportunities to work on projects across the breadth of genomics! ejnh.fa.em2.oraclecloud.com/hcmUI/Candid...
7mo