We updated our comparative genomics pipeline bacLIFE, it will now make use of BAKTA and BiG-SCAPE in addition to the newest PFAM and DBCAN database. LAGs and GCFs are now better annotated. Several other minor changes are included too. @vcarryon.bsky.social
github.com/Carrion-lab/...
Because of several major changes when updating baclife I recommend reinstalling all conda environments.
Major changes
We do not longer rely on PROKKA which will no longer be updated. BacLIFE now ...
